BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C06LP1|AL426978
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1771 0.0
>3x_Contig1264
Length = 6524
Score = 1771 bits (890), Expect = 0.0
Identities = 898/904 (99%)
Strand = Plus / Plus
Query: 1 gatcatcttcatcagattgtgatgcattcaacttgggtgtctttgttggtggagatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gatcatcttcatcagattgtgatgcattcaacttgggtgtctttgttggtggagatggaa 654
Query: 61 tactatttgawagatgcctcttcaaattattcctttcatcctcggcaggctcatcatcta 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tactatttgaaagatgcctcttcaaattattcctttcatcctcggcaggctcatcatcta 714
Query: 121 ctatcagggtttcgatggcttgaatatggtcttcagttctatcttggtctgcatcgacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ctatcagggtttcgatggcttgaatatggtcttcagttctatcttggtctgcatcgacag 774
Query: 181 ctgtttgttcatcctctgcattctcataaggggaatgataagtgtatgtatctcttggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctgtttgttcatcctctgcattctcataaggggaatgataagtgtatgtatctcttggta 834
Query: 241 gatttggtaactgaaggtcttccccgctattttctggtacaaattccaagtagaactcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gatttggtaactgaaggtcttccccgctattttctggtacaaattccaagtagaactcaa 894
Query: 301 ttgactgccttwattgagcaccatcttccatttcctcgtctttataaagaagaaaagtac 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ttgactgccttaattgagcaccatcttccatttcctcgtctttataaagaagaaaagtac 954
Query: 361 cagttctgaagttgaatcttgaaagcttccggcattctaaatcatcaaaatcaaaatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 cagttctgaagttgaatcttgaaagcttccggcattctaaatcatcaaaatcaaaatcgt 1014
Query: 421 acaataagctgttagtattagtatcgagaacggagtattcaccagtgaactcatattttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 acaataagctgttagtattagtatcgagaacggagtattcaccagtgaactcatattttg 1074
Query: 481 awatgattttctgattaagatcgtacaaagacatgtgcacaacaattgcctttggtattt 540
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1075 aaatgattttctgattaagatcgtacaaagacatgtgctcaacaattgcctttggtattt 1134
Query: 541 tcagtacggctctttgaatgttagaagatactgaacaatgaggattcttgggtgcgagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 tcagtacggctctttgaatgttagaagatactgaacaatgaggattcttgggtgcgagag 1194
Query: 601 ttggattcgatagatacctatttgtggtgatattacttgcccttgccgtaaatgccattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 ttggattcgatagatacctatttgtggtgatattacttgcccttgccgtaaatgccattg 1254
Query: 661 gaatttctaaaggattatttgatacgttactcaacaagtttagaacacgtaaagaaacca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 gaatttctaaaggattatttgatacgttactcaacaagtttagaacacgtaaagaaacca 1314
Query: 721 atgaaraaagaccggcgatgatcgcgtttgtagtggcaatggcaggaataatgttaccag 780
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 atgaagaaagaccggcgatgatcgcgtttgtagtggcaatggcaggaataatgttaccag 1374
Query: 781 ccatttgtttaatatcaaagacagatttaggtgcaatgtggaagatgtaagatctgatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 ccatttgtttaatatcaaagacagatttaggtgcaatgtggaagatgtaagatctgatat 1434
Query: 841 tcgcggcacaagctacaaacaataaggtatcgtcatcatccttatcgaattctatraatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1435 tcgcggcacaagctacaaacaataaggtatcgtcatcatccttatcgaattctatgaatg 1494
Query: 901 gttc 904
||||
Sbjct: 1495 gttc 1498
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7439
Number of Sequences: 1807
Number of extensions: 7439
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)